Projects

Research

Summary of my main research topics

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Software/Tools

Summary of computational tools I have worked on

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Research

Cell-cell interactions and communication

Cell-cell interactions define high-order organizations in multicellular organisms, influencing their phenotypes. In this regard, I am interested in helping to understand how CCIs and phenotype are connected, in both a cellular and molecular level.

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Cellular metabolism

Cellular metabolism orchestrates the supply of resources and energy needed for the diversity of cellular functions. I aim to quantify metabolic activities within individual cells by using metabolic modeling and machine learning to understand physiological functions and dysregulation during aging and diseases.

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Software/Tools

Computational suite for studying cell-cell interactions and communication

Computational suite implementing different methods to study cell-cell interactions from expression levels of genes/proteins

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Docker container for single-cell analyses

Docker container with a set of tools for single-cell transcriptomic analyses

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Utility for facilitating the use of COBRApy

Tool to facilitate the use of COBRApy and the manipulation of metabolic networks

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